Aprea Therapeutics, Inc. quarterly report, Q3 FY2019

Aprea Therapeutics, Inc. — Q3 2019 Form 10-Q

Reporting period: Three and nine months ended September 30, 2019. The company is a clinical-stage biopharmaceutical developer focused on cancer therapies that reactivate mutant p53. It had no product revenue and no approved products.

Financial and operating metrics

MetricQ3 2019Q3 2018Nine months 2019Nine months 2018
Revenue$0$0$0$0
Research and development expense$4.91 million$2.31 million$12.91 million$9.80 million
General and administrative expense$2.31 million$0.62 million$4.66 million$1.79 million
Total operating expenses$7.22 million$2.93 million$17.56 million$11.59 million
Net loss$6.25 million$3.14 million$14.99 million$10.85 million
Net loss per share, basic and diluted$5.29$2.72$12.72$9.40
Net cash used in operating activitiesNot presented quarterlyNot presented quarterly$16.21 million$11.40 million

Gross margin is not meaningful because the company had no revenue. Q3 net loss included a $0.98 million foreign-currency gain, compared with a $0.21 million loss in Q3 2018; the nine-month foreign-currency gain was $2.59 million versus $0.74 million. Comprehensive loss was $9.19 million in Q3 and $19.91 million for the nine-month period, including foreign-currency translation losses.

  • Liquidity at September 30: Cash and cash equivalents of $52.33 million, down from $65.68 million at December 31, 2018. Total assets were $57.34 million; total liabilities were $9.94 million. Accumulated deficit was $77.46 million.
  • Cash flows, nine months: Operating cash use of $16.21 million; investing cash use of $16,435; financing cash inflow of $5.62 million, mainly from Series C preferred stock. Cash decreased by $10.61 million before a $2.74 million adverse exchange-rate effect.
  • Debt and obligations: The filing reports no borrowings; lease liabilities totaled approximately $585,000. Future operating lease payments were $612,649 before imputed interest.

Changes versus the prior comparable period

  • Nine-month operating expenses increased $5.97 million and net loss increased $4.14 million year over year. R&D spending rose $3.11 million, primarily from advancing APR-246; G&A rose $2.87 million, principally from reorganization, IPO-readiness, legal and accounting costs, and personnel-related expense.
  • Operating cash use increased $4.81 million year over year. The filing attributes the increase mainly to higher adjusted losses and IPO-related deferred offering costs, partly offset by increased accounts payable and accrued liabilities.
  • The company adopted the new lease accounting standard in 2019, recognizing right-of-use assets and lease liabilities.

Outlook, notable events, and risks

  • Aprea began a pivotal Phase 3 trial of APR-246 with azacitidine for frontline TP53-mutant MDS in Q1 2019. Management expected initial data in the second half of 2020. Other ongoing studies included Phase 1b/2 trials in the United States and France and a Phase 2 post-transplant maintenance study.
  • In October 2019, after quarter-end, the company completed its IPO: 6,516,667 shares at $15 per share, for approximately $97.75 million gross proceeds and approximately $90.9 million after underwriting discounts and commissions, before other offering expenses. Management said IPO proceeds plus September cash were expected to fund operations and capital needs into 2023; this estimate depends on assumptions and could prove incorrect. The company reported that IPO proceeds had not yet been used as of the filing.
  • The September corporate reorganization made Aprea Therapeutics AB a wholly owned subsidiary. The IPO converted outstanding preferred stock into common stock. Preferred-stock liquidation preferences and accumulated dividend rights were material before conversion.
  • Clinical and regulatory outcomes remain uncertain. The filing describes serious adverse events in APR-246 trials and one investigator-reported death possibly related to both APR-246 and azacitidine. Management noted that causality was uncertain and cited underlying disease, comorbidities, or other treatment as possible causes.
  • Key risks include trial failure or delay, limited patient populations, reliance on third parties and a single API manufacturer for APR-246, uncertain patent protection (the compound’s chemical structure is in the public domain), and the need for future funding. The company also identified a material weakness in financial-reporting controls related to insufficient U.S. GAAP and SEC-reporting expertise; remediation was underway. Management nevertheless concluded disclosure controls and procedures were effective as of September 30, 2019.
  • No material legal proceedings or recorded contingent-loss provision were reported. The filing states that the company had no off-balance-sheet arrangements.

Important facts for investors to verify

  • Progress, enrollment, safety findings, and timing of results for the pivotal Phase 3 APR-246 trial, including whether initial data timing remains on track.
  • Actual cash use and updated runway assumptions following the IPO, including whether management’s expected funding horizon into 2023 remains supportable.
  • Remediation of the disclosed material weakness and the reliability of future financial reporting.
  • APR-246 manufacturing continuity and the scope, validity, and enforceability of its method-of-use and formulation patent protection.
  • Clinical safety disclosures, especially serious adverse events and the reported possibly treatment-related death, as trial data mature.